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Atopobiaceae

From Wikipedia, the free encyclopedia

Atopobiaceae
Scientific classification
Domain:
Bacteria
Phylum:
Actinomycetota
Class:
Coriobacteriia
Order:
Coriobacteriales
Family:
Atopobiaceae

Gupta et al. 2013[1]
Genera[2]
  • Atopobium
  • Caniella
  • "Ca. Coprovicinus"
  • Fannyhessea
  • Granulimonas
  • Lancefieldella
  • Leptogranulimonas
  • Muricaecibacterium
  • "Olegusella"
  • Olsenella
  • Parafannyhessea
  • Paratractidigestivibacter
  • Parolsenella
  • Thermophilibacter
  • Tractidigestivibacter

The Atopobiaceae are a family of Actinomycetota.[1][2]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[2] and National Center for Biotechnology Information (NCBI).[3]

Nouioui et al. 2018[4] 16S rRNA based LTP_08_2023[5][6][7] 120 marker proteins based GTDB 08-RS214[8][9][10]
Atopobiaceae
Atopobiaceae

Fannyhessea

Lancefieldella

Atopobium

Thermophilibacter

Olsenella species-group 2

Parafannyhessea

Olsenella urininfantis

Olsenella uli

Olsenella porci

Olsenella massiliensis

Granulimonas Morinaga et al. 2022

Leptogranulimonas Morinaga et al. 2022

Tractidigestivibacter

Paratractidigestivibacter

Parolsenella

Atopobiaceae

Parolsenella Sakamoto et al. 2018

"Ca. Coprovicinus" Gilroy et al. 2021

Atopobium Collins & Wallbanks 1993

"Olegusella massiliensis" Diop et al. 2016

Fannyhessea Nouioui et al. 2018

Olsenella species-group 2

Parafannyhessea Zgheib et al. 2021

Olsenella Dewhirst et al. 2001

Tractidigestivibacter Zgheib et al. 2021

Lancefieldella Nouioui et al. 2018

Paratractidigestivibacter Zgheib et al. 2021

Thermophilibacter Zgheib et al. 2021

See also

References

  1. ^ a b Gupta RS, Chen WJ, Adeolu M, Chai Y (2013). "Molecular signatures for the class Coriobacteriia and its different clades; Proposal for division of the class Coriobacteriia into the emended order Coriobacteriales, containing the emended family Coriobacteriaceae and Atopobiaceae fam. nov., and Eggerthellales ord. nov., containing the family Eggerthellaceae fam. nov". Int J Syst Evol Microbiol. 63 (Pt 9): 3379–3397. doi:10.1099/ijs.0.048371-0. PMID 23524353.
  2. ^ a b c Euzéby JP, Parte AC. "Atopobiaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved June 23, 2021.
  3. ^ Sayers; et al. "Atopobiaceae". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2021-03-20.
  4. ^ Nouioui I, Carro L, García-López M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Markus Göker M (2018). "Genome-Based Taxonomic Classification of the Phylum Actinobacteria". Front. Microbiol. 9: 2007. doi:10.3389/fmicb.2018.02007. PMC 6113628. PMID 30186281.
  5. ^ "The LTP". Retrieved 20 November 2023.
  6. ^ "LTP_all tree in newick format". Retrieved 20 November 2023.
  7. ^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
  8. ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
  9. ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
  10. ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
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This page was last edited on 8 February 2024, at 09:36
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