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Mutation–selection balance

From Wikipedia, the free encyclopedia

Mutation–selection balance is an equilibrium in the number of deleterious alleles in a population that occurs when the rate at which deleterious alleles are created by mutation equals the rate at which deleterious alleles are eliminated by selection.[1][2][3][4] The majority of genetic mutations are neutral or deleterious; beneficial mutations are relatively rare. The resulting influx of deleterious mutations into a population over time is counteracted by negative selection, which acts to purge deleterious mutations. Setting aside other factors (e.g., balancing selection, and genetic drift), the equilibrium number of deleterious alleles is then determined by a balance between the deleterious mutation rate and the rate at which selection purges those mutations.

Mutation–selection balance was originally proposed to explain how genetic variation is maintained in populations, although several other ways for deleterious mutations to persist are now recognized, notably balancing selection.[3] Nevertheless, the concept is still widely used in evolutionary genetics, e.g. to explain the persistence of deleterious alleles as in the case of spinal muscular atrophy,[5][4] or, in theoretical models, mutation-selection balance can appear in a variety of ways and has even been applied to beneficial mutations (i.e. balance between selective loss of variation and creation of variation by beneficial mutations).[6]

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  • Mutations - selection: the bacteria resist
  • Haw to find equilibrium frequency of allele under the influence of mutation
  • Mutation

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Mutations - selection: the bacteria resist Aha, here’s our patient! The patient has received all known antibiotic treatments to no effect! In conclusion: either he is not ill, or we have a new strain of microbes! Hmm! Or this could even just be a case of resistance to antibiotics. Let me explain... When the body is infected by bacteria... ...it attempts to defend itself in several ways... ...by increasing its temperature... ...but mainly by using its immune system. As soon as a foreign body enters the organism, it’s detected straight away and alarm bells ring. Lots of white blood cells come along to identify the culprits... ...and get rid of them. But sometimes these defences are overwhelmed by bacteria. That’s when the illness really begins. Luckily, since antibiotics were discovered, we can help patients protect themselves. These drugs destroy most bacteria,... ...or create a hostile environment for them. Antibiotics soon became a quick-fix solution. For the slightest scratch, a course of antibiotics!!! It was so effective in preventing infections from developing... ...that the use of antibiotics increased... ...they became widely used to treat battery-farmed poultry and pigs. But before long the illness returns... ...and antibiotic treatments suddenly stop working. What happened? Well, before bacterial cells divide, they duplicate their genetic material. This material is composed of DNA. Portions of the long molecule can hold precise information on the activity and development of the bacteria. These portions are what we call genes. Each gene is composed of a sequence of four elements called nucleotides,... ...of which two are always matched in pairs because they are complementary. As DNA is copied very rapidly, errors in the copy frequently occur. These errors are called mutations. Most of the time these mutations are of no consequence, but sometimes they can be harmful to the bacteria. However, with such a high number of mutations, some of these copy errors can result in resistance to antibiotics. When in contact with the antibiotic, the resistant bacteria will be the only ones to survive. In fact the drug will have chosen THE resistant strain! And then, since there is no longer any competition for food, the bacteria can multiply very fast. It’s exactly like natural selection! Individuals with the most favourable characteristics reproduce more than the others... ...and will be able to continue to evolve. Indeed, with antibiotics, we are reproducing what nature did 4 billion years ago that led to the evolution of species. Well miss, are you demonstrating here that the patient is suffering from acute Darwinitis? Hmm..you could say that... Aha! That’s exactly how I see it! Gentlemen, this case is very interesting! Let’s move on to something else! subtitles: Yannick Mahé

Haploid population

As a simple example of mutation-selection balance, consider a single locus in a haploid population with two possible alleles: a normal allele A with frequency , and a mutated deleterious allele B with frequency , which has a small relative fitness disadvantage of . Suppose that deleterious mutations from A to B occur at rate , and the reverse beneficial mutation from B to A occurs rarely enough to be negligible (e.g. because the mutation rate is so low that is small). Then, each generation selection eliminates deleterious mutants reducing by an amount , while mutation creates more deleterious alleles increasing by an amount . Mutation–selection balance occurs when these forces cancel and is constant from generation to generation, implying .[3] Thus, provided that the mutant allele is not weakly deleterious (very small ) and the mutation rate is not very high, the equilibrium frequency of the deleterious allele will be small.

Diploid population

In a diploid population, a deleterious allele B may have different effects on individual fitness in heterozygotes AB and homozygotes BB depending on the degree of dominance of the normal allele A. To represent this mathematically, let the relative fitness of deleterious homozygotes and heterozygotes be smaller than that of normal homozygotes AA by factors of and respectively, where is a number between and measuring the degree of dominance ( indicates that A is completely dominant while indicates no dominance). For simplicity, suppose that mating is random.

The degree of dominance affects the relative importance of selection on heterozygotes versus homozygotes. If A is not completely dominant (i.e. is not close to zero), then deleterious mutations are primarily removed by selection on heterozygotes because heterozygotes contain the vast majority of deleterious B alleles (assuming that the deleterious mutation rate is not very large). This case is approximately equivalent to the preceding haploid case, where mutation converts normal homozygotes to heterozygotes at rate and selection acts on heterozygotes with selection coefficient ; thus .[1]

In the case of complete dominance (), deleterious alleles are only removed by selection on BB homozygotes. Let , and be the frequencies of the corresponding genotypes. The frequency of normal alleles A increases at rate due to the selective elimination of recessive homozygotes, while mutation causes to decrease at rate (ignoring back mutations). Mutation–selection balance then gives , and so the frequency of deleterious alleles is .[1] This equilibrium frequency is potentially substantially larger than for the case of partial dominance, because a large number of mutant alleles are carried in heterozygotes and are shielded from selection.

Many properties of a non random mating population can be explained by a random mating population whose effective population size is adjusted. However, in non-steady state population dynamics there can be a lower prevalence for recessive disorders in a random mating population during and after a growth phase.[7][8]

See also

References

  1. ^ a b c Crow, James F.; Kimura, Motoo (1970). An Introduction to Population Genetics Theory ([Reprint] ed.). New Jersey: Blackburn Press. ISBN 9781932846126.
  2. ^ Lynch, Michael (August 2010). "Evolution of the mutation rate". Trends in Genetics. 26 (8): 345–352. doi:10.1016/j.tig.2010.05.003. PMC 2910838. PMID 20594608.
  3. ^ a b c Barton, Nicholas H. (2007). Evolution. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press. ISBN 9780879696849.
  4. ^ a b Herron, JC and S Freeman. 2014. Evolutionary Analysis, 5th Edition. Pearson.
  5. ^ Wirth, B; Schmidt, T; Hahnen, E; Rudnik-Schöneborn, S; Krawczak, M; Müller-Myhsok, B; Schönling, J; Zerres, K (1997). "De Novo Rearrangements Found in 2% of Index Patients with Spinal Muscular Atrophy: Mutational Mechanisms, Parental Origin, Mutation Rate, and Implications for Genetic Counseling". The American Journal of Human Genetics. 61 (5): 1102–1111. doi:10.1086/301608. PMC 1716038. PMID 9345102.
  6. ^ Fisher, Daniel S.; Desai, Michael M. (July 1, 2007). "Beneficial Mutation–Selection Balance and the Effect of Linkage on Positive Selection". Genetics. 176 (3): 1759–1798. doi:10.1534/genetics.106.067678. PMC 1931526. PMID 17483432.
  7. ^ La Rocca, Luis A.; Frank, Julia; Bentzen, Heidi Beate; Pantel, Jean-Tori; Gerischer, Konrad; Bovier, Anton; Krawitz, Peter M. (2020-12-22). "A lower prevalence for recessive disorders in a random mating population is a transient phenomenon during and after a growth phase". arXiv:2012.04968 [q-bio.PE].
  8. ^ "visualization of effects of different mating schemes". YouTube.
This page was last edited on 27 September 2023, at 19:00
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