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Colletotrichum

From Wikipedia, the free encyclopedia

Colletotrichum
C. lindemuthianum on bean pods
Scientific classification Edit this classification
Domain: Eukaryota
Kingdom: Fungi
Division: Ascomycota
Class: Sordariomycetes
Order: Glomerellales
Family: Glomerellaceae
Genus: Colletotrichum
Corda, 1831
Species complexes

See text

Colletotrichum (sexual stage: Glomerella) is a genus of fungi that are symbionts to plants as endophytes (living within the plant) or phytopathogens. Many of the species in this genus are plant pathogens, but some species may have a mutualistic relationship with hosts.[1]

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Transcription

History

The history of the Colletotrichum genus is a case study on the tension between the lumpers and splitters.[2] While the genus Colletotrichum was first proposed in 1831,[3] the exact definition of Colletotrichum and the species that belong in this genus has been in flux ever since.[4] The biggest recent shift has been from a definition (of both the genus and the species within it) based on morphology to a definition based on a combination of morphology and molecular phylogenetics.[5][4] The use of molecular phylogenetics has led to a huge increase in the number of recognized species in this genus, and the species are now organized into species complexes that usually have the name of their most widely known species. The name of a species when referring its namesake species complex will often have the suffix s.l. or sensu lato (in the broad sense) while that same name when referring to the specific species within the species complex will have the suffix of s.s. or sensu stricto (in the strict sense).

The most recent assessment of this genus identifies 248 species, most of which are categorized into 14 species complexes.[6] If history is any indicator of the future, then the list of species complexes and species within this genus will continue to be redefined and reorganized as more information becomes available.

Species and species complexes

Colletotrichum acutatum species complex [7]

  • Colletotrichum abscissum
  • Colletotrichum acerbum
  • Colletotrichum acutatum sensu stricto
  • Colletotrichum arboricola
  • Colletotrichum australe
  • Colletotrichum brisbanense
  • Colletotrichum cairnsense
  • Colletotrichum carthami
  • Colletotrichum chrysanthemi
  • Colletotrichum citri
  • Colletotrichum cosmi
  • Colletotrichum costaricense
  • Colletotrichum cuscutae
  • Colletotrichum eriobotryae
  • Colletotrichum fioriniae
  • Colletotrichum godetiae
  • Colletotrichum guajavae
  • Colletotrichum indonesiense
  • Colletotrichum javanense
  • Colletotrichum johnstonii
  • Colletotrichum kinghornii
  • Colletotrichum laticiphilum
  • Colletotrichum lauri
  • Colletotrichum limetticola
  • Colletotrichum lupini
  • Colletotrichum melonis
  • Colletotrichum nymphaeae
  • Colletotrichum paranaense
  • Colletotrichum paxtonii
  • Colletotrichum phormii
  • Colletotrichum pyricola
  • Colletotrichum rhombiforme
  • Colletotrichum roseum
  • Colletotrichum salicis
  • Colletotrichum scovillei
  • Colletotrichum simmondsii
  • Colletotrichum sloanei
  • Colletotrichum tamarilloi
  • Colletotrichum walleri
  • Colletotrichum wanningense

Colletotrichum agaves species complex [6]

  • Colletotrichum agaves sensu stricto
  • Colletotrichum euphorbiae
  • Colletotrichum ledebouriae
  • Colletotrichum neosansevieriae
  • Colletotrichum sansevieriae

Colletotrichum boninense species complex [8]

  • Colletotrichum annellatum
  • Colletotrichum beeveri
  • Colletotrichum boninense sensu stricto
  • Colletotrichum brasiliense
  • Colletotrichum brassicicola
  • Colletotrichum camelliae-japonicae
  • Colletotrichum catinaense
  • Colletotrichum citricola
  • Colletotrichum colombiense
  • Colletotrichum condaoense
  • Colletotrichum constrictum
  • Colletotrichum cymbidiicola
  • Colletotrichum dacrycarpi
  • Colletotrichum doitungense
  • Colletotrichum feijoicola
  • Colletotrichum hippeastri
  • Colletotrichum karstii
  • Colletotrichum limonicola
  • Colletotrichum novae-zelandiae
  • Colletotrichum oncidii
  • Colletotrichum parsonsiae
  • Colletotrichum petchii
  • Colletotrichum phyllanthi
  • Colletotrichum torulosum
  • Colletotrichum watphraense

Colletotrichum dematium species complex [9]

  • Colletotrichum anthrisci
  • Colletotrichum circinans
  • Colletotrichum dematium sensu stricto
  • Colletotrichum eryngiicola
  • Colletotrichum fructi
  • Colletotrichum hemerocallidis
  • Colletotrichum insertae
  • Colletotrichum jinshuiense
  • Colletotrichum kakivorum
  • Colletotrichum lineola
  • Colletotrichum menispermi
  • Colletotrichum orchidis
  • Colletotrichum parthenocissicola
  • Colletotrichum sambucicola
  • Colletotrichum sedi
  • Colletotrichum sonchicola
  • Colletotrichum spinaciae

Colletotrichum destructivum species complex [10]

  • Colletotrichum americae-borealis
  • Colletotrichum antirrhinicola
  • Colletotrichum atractylodicola
  • Colletotrichum bryoniicola
  • Colletotrichum destructivum sensu stricto
  • Colletotrichum fuscum
  • Colletotrichum higginsianum
  • Colletotrichum lentis
  • Colletotrichum lini
  • Colletotrichum ocimi
  • Colletotrichum panacicola
  • Colletotrichum pisicola
  • Colletotrichum shisoi
  • Colletotrichum tabacum
  • Colletotrichum tanaceti
  • Colletotrichum utrechtense
  • Colletotrichum vignae

Colletotrichum dracaenophilum species complex [11]

  • Colletotrichum cariniferi
  • Colletotrichum coelogynes
  • Colletotrichum dracaenophilum sensu stricto
  • Colletotrichum excelsum-altitudinum
  • Colletotrichum parallelophorum
  • Colletotrichum tongrenense
  • Colletotrichum tropicicola
  • Colletotrichum yunnanense

Colletotrichum gigasporum species complex [12]

  • Colletotrichum arxii
  • Colletotrichum chiangraiense
  • Colletotrichum gigasporum sensu stricto
  • Colletotrichum jishouense
  • Colletotrichum magnisporum
  • Colletotrichum pseudomajus
  • Colletotrichum radicis
  • Colletotrichum serranegrense
  • Colletotrichum vietnamense

Colletotrichum gloeosporioides species complex [13]

  • Colletotrichum aenigma
  • Colletotrichum aeschynomenes
  • Colletotrichum alatae
  • Colletotrichum alienum
  • Colletotrichum aotearoa
  • Colletotrichum arecicola
  • Colletotrichum artocarpicola
  • Colletotrichum asianum
  • Colletotrichum avicenniae[14]
  • Colletotrichum camelliae
  • Colletotrichum changpingense
  • Colletotrichum chrysophillum
  • Colletotrichum cigarro
  • Colletotrichum clidemiae
  • Colletotrichum cobbittiense
  • Colletotrichum conoides
  • Colletotrichum cordylinicola
  • Colletotrichum endophytica
  • Colletotrichum fragariae
  • Colletotrichum fructicola
  • Colletotrichum fructivorum
  • Colletotrichum gloeosporioides sensu stricto
  • Colletotrichum grevilleae
  • Colletotrichum grossum
  • Colletotrichum hebeiense
  • Colletotrichum hederiicola
  • Colletotrichum helleniense
  • Colletotrichum henanense
  • Colletotrichum horii
  • Colletotrichum hystricis
  • Colletotrichum jiangxiense
  • Colletotrichum kahawae
  • Colletotrichum lumnitzerae
  • Colletotrichum makassarense
  • Colletotrichum musae
  • Colletotrichum noveboracense
  • Colletotrichum nupharicola
  • Colletotrichum perseae
  • Colletotrichum proteae
  • Colletotrichum pseudotheobromicola
  • Colletotrichum psidii
  • Colletotrichum queenslandicum
  • Colletotrichum rhexiae
  • Colletotrichum salsolae
  • Colletotrichum siamense
  • Colletotrichum syzygiicola
  • Colletotrichum tainanense
  • Colletotrichum temperatum
  • Colletotrichum theobromicola
  • Colletotrichum ti
  • Colletotrichum tropicale
  • Colletotrichum viniferum
  • Colletotrichum wuxiense
  • Colletotrichum xanthorrhoeae
  • Colletotrichum yulongense

Colletotrichum graminicola-caudatum species complex [6]

Colletotrichum magnum species complex [11]

  • Colletotrichum brevisporum
  • Colletotrichum cacao
  • Colletotrichum liaoningense
  • Colletotrichum lobatum
  • Colletotrichum magnum sensu stricto
  • Colletotrichum merremiae
  • Colletotrichum okinawense
  • Colletotrichum panamense

Colletotrichum orbiculare species complex [6]

Colletotrichum orchidearum species complex [11]

  • Colletotrichum aracearum
  • Colletotrichum cattleyicola
  • Colletotrichum cliviicola
  • Colletotrichum musicola
  • Colletotrichum orchidearum sensu stricto
  • Colletotrichum piperis
  • Colletotrichum plurivorum
  • Colletotrichum sojae
  • Colletotrichum vittalense

Colletotrichum spaethianum species complex [9]

  • Colletotrichum bletillum
  • Colletotrichum guizhouensis
  • Colletotrichum incanum
  • Colletotrichum lilii
  • Colletotrichum liriopes
  • Colletotrichum riograndense
  • Colletotrichum spaethianum sensu stricto
  • Colletotrichum tofieldiae
  • Colletotrichum verruculosum

Colletotrichum truncatum species complex [9]

  • Colletotrichum acidae
  • Colletotrichum curcumae
  • Colletotrichum fusiforme
  • Colletotrichum jasminigenum
  • Colletotrichum truncatum sensu stricto

Singleton species [6]

Species names that are no longer valid or have been synonymized

References

  1. ^ Rodriguez, R.; Redman, R. (2008). "More than 400 million years of evolution and some plants still can't make it on their own: plant stress tolerance via fungal symbiosis". Journal of Experimental Botany. 59 (5): 1109–1114. doi:10.1093/jxb/erm342. PMID 18267941.
  2. ^ Hyde, Kevin David, Lei Cai, E. H. C. McKenzie, Y. L. Yang, J. Z. Zhang, and H. Prihastuti (2009). "Colletotrichum : a catalogue of confusion" (PDF). Fungal Diversity. 39.{{cite journal}}: CS1 maint: multiple names: authors list (link)
  3. ^ August Carl Joseph, Corda (1831). Sturm, Jakob (ed.). Deutschlands Flora in Abbildungen nach der Natur mit Beschreibungen (in German). Vol. 3. Nürnberg, Germany. pp. 33–64.
  4. ^ a b Cannon, P.F.; Damm, U.; Johnston, P.R.; Weir, B.S. (2012). "Colletotrichum – current status and future directions". Studies in Mycology. 73 (1): 181–213. doi:10.3114/sim0014. PMC 3458418. PMID 23136460.
  5. ^ Cai, L., Hyde, K.D., Taylor, P.W.J., Weir, B.S., Waller, J., Abang, M.M., Zhang, J.Z., Yang, Y.L., Phoulivong, S., Liu, Z.Y., Prihastuti, H., Shivas, R.G., McKenzie, E.H.C. and Johnston, P.R. (2009). "A polyphasic approach for studying Colletotrichum" (PDF). Fungal Diversity. 39: 183–204.{{cite journal}}: CS1 maint: multiple names: authors list (link)
  6. ^ a b c d e Bhunjun, Chitrabhanu S.; Phukhamsakda, Chayanard; Jayawardena, Ruvishika S.; Jeewon, Rajesh; Promputtha, Itthayakorn; Hyde, Kevin D. (2021). "Investigating species boundaries in Colletotrichum". Fungal Diversity. 107 (1): 107–127. doi:10.1007/s13225-021-00471-z. ISSN 1878-9129. S2CID 233617783.
  7. ^ Damm, U.; Cannon, P.F.; Woudenberg, J.H.C.; Crous, P.W. (2012). "The Colletotrichum acutatum species complex". Studies in Mycology. 73 (1): 37–113. doi:10.3114/sim0010. PMC 3458416. PMID 23136458.
  8. ^ Damm, U.; Cannon, P.F.; Woudenberg, J.H.C.; Johnston, P.R.; Weir, B.S.; Tan, Y.P.; Shivas, R.G.; Crous, P.W. (2012). "The Colletotrichum boninense species complex". Studies in Mycology. 73 (1): 1–36. doi:10.3114/sim0002. PMC 3458415. PMID 23136457.
  9. ^ a b c Jayawardena RS, Hyde KD, Damm U, Cai L, Liu M, Li XH, Zhang W, Zhao WS, and Yan JY (2016). "Notes on currently accepted species of Colletotrichum" (PDF). Mycosphere. 7 (8): 1192–1260. doi:10.5943/mycosphere/si/2c/9.{{cite journal}}: CS1 maint: multiple names: authors list (link)
  10. ^ Damm, U.; O'Connell, R. J.; Groenewald, J. Z.; Crous, P. W. (2014). "The Colletotrichum destructivum species complex – hemibiotrophic pathogens of forage and field crops". Studies in Mycology. 79: 49–84. doi:10.1016/j.simyco.2014.09.003. ISSN 0166-0616. PMC 4255528. PMID 25492986.
  11. ^ a b c Damm, U.; Sato, T.; Alizadeh, A.; Groenewald, J.Z.; Crous, P.W. (2018). "The Colletotrichum dracaenophilum, C. magnum and C. orchidearum species complexes". Studies in Mycology. 90 (1): 71–118. doi:10.1016/j.simyco.2017.11.002. ISSN 0166-0616. PMC 5738211. PMID 29276320. S2CID 37921559.
  12. ^ Liu, F.; Cai, L.; Crous, P.W.; Damm, U. (2014). "The Colletotrichum gigasporum species complex". Persoonia - Molecular Phylogeny and Evolution of Fungi. 33 (1): 83–97. doi:10.3767/003158514X684447. PMC 4312939. PMID 25737595.
  13. ^ Weir, B.S.; Johnston, P.R.; Damm, U. (2012). "The Colletotrichum gloeosporioides species complex". Studies in Mycology. 73 (1): 115–180. doi:10.3114/sim0011. PMC 3458417. PMID 23136459.
  14. ^ Aumentado, H. D. R., Armand, A., Phukhamsakda, C., Hyde, K. D., Jones, E. G., & Jayawardena, R. S. (2024). Polyphasic identification of two novel Colletotrichum species causing leaf spots on mangroves in Thailand. European Journal of Plant Pathology, 1-27.doi:10.1007/s10658-024-02819-y

Further reading

This page was last edited on 5 May 2024, at 18:54
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